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News Archive

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New Workflow Designer

GeneProf now features an improved, faster and prettier workflow designer tool!

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Paired-end FASTQ

The new version of GeneProf (launched today) brings better support for paired-end FASTQ files via the data analysis wizards!

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Genome Browser fixed

An issue that resulted in the genome browser not being updated after changing the track selection has been fixed.

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GeneProf Web Services

GeneProf now provides a collection of web services that allow programmatic retrieval of data from its databases!

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First GeneProf-powered Paper

Festuccia et al. have just published the first paper benefiting from GeneProf-powered analysis in the latest issue of Cell Stem Cell.

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Correlated Genes

There's a new section in the gene summary pages: Find out more about genes with correlated expression patterns in an instant!

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Power Maintenance

Power maintenance work will result in a shutdown of the GeneProf servers on 16/August/2012.

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Recent Updates

Several minor changes have been rolled out over the past weeks, e.g. bugfixes for SRA and ENA data import and password-based sharing of experiments.

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Recent GeneProf Updates

We've launched a number of changes and improvements to the GeneProf interface and backend over the past weeks. The RNA-seq and ChIP-seq wizard have been updated, we've fixed bugs in the interface and uploader tool and there are a few new analysis modules.

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Server Problems

Our apologies for recent server downtimes!

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Power Upgrade

The GeneProf servers will be unavailable on Thursday, 16 Feb 1012, from approximately 17:00-18:00 (GMT).

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New Release

The latest GeneProf release is out. The new version features improved plots and an updated manual.

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Rice and Arabidopsis

New reference datasets have been added for O. sativa and A. thaliana.

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GeneProf Release

The GeneProf paper has just been published in the latest issue of Nature Methods and GeneProf has been released to the public!

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We're moving!

The Institute for Stem Cell Research is moving to its new home at the SCRM building across town.. and so are the GeneProf servers. Expect downtimes during the next days.

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GeneProf's back!

We've completed the essential system maintenance over the past weekend and all GeneProf services should now be back to normal.

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System Maintenance

The GeneProf systems will be undergoing some essential maintenance starting Friday, 9 September. Some services will be temporarily unavailable.

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API, Modules & Manual

GeneProf now offers a flexible Web API for programmatic access to GeneProf data. Also, we've added more modules and updated the manual to reflect the most recent changes.

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New Update Policy

We've recently restarted the GeneProf servers quite a few times and realized that this might be quite disruptive of your work. Please accept our apologies. In future, all updates to the GeneProf system will be rolled out during a weekly mainenance session on Wednesday mornings (UK time).

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Better Interface, Collaborations & Data

We've further improved many parts of the GeneProf interface, added a pre-publication data sharing feature and augmented the database with lots of new data.

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Improved Genome Browser

We've worked on the GeneProf's genome browser and made some improvements. The new version should be a little faster and provides many additional features.

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Screencasts!

We've added some screencasts show-casing some of GeneProf's most interesting features.

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Manual Complete

GeneProf's online and offline manual is now complete!

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Closed Beta Open!

GeneProf is now open to a selected beta testers.

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