(c) 2009-2013, F. Halbritter & S. R. Tomlinson, ISCR/CRM, Edinburgh, UK. GeneProf Version: 1.1303274 - Terms & Conditions / Cookies & Privacy / Bugs & Features here please!

No JavaScript!

Sorry, GeneProf requires JavaScript to be enabled. All modern browsers natively support JavaScript, so you've probably turned it off in your browser settings. Please activate JS before you continue.

GeneProf does not require you to install any additional software. A public instance of the software can be accessed via your web browser. GeneProf makes use of modern browser technologies based on JavaScript to provide you with a rich, user-friendly interface. This technology is supported in all modern web browsers, but might need to be enabled (mostly, it's enabled by default). Please refer to this tutorial from Google to find out how to enable JavaScript in your browser.

At the moment, GeneProf has been tested on these browsers:

	Firefox 3.x+	(this is the recommended browser)
	Chrome (any version)
	Internet Explorer 7+
	Safari 5+
	Opera 11+

We also recommend a screen resolution of at least 1024x768 pixels for optimal use of GeneProf. A higher resolution will provide for an even better user experience.

Ensembl 58 Mouse Genes, NCBIM37 Assembly - Dppa5a (Record #6509)

Dataset:

Ensembl 58 Mouse Genes, NCBIM37 Assembly (gpDS_pub_mm_ens58_ncbim37)

Search for a Gene

Feature 'Dppa5a'

Permalink:	http://www.geneprof.org/GeneProf/show?id=gpFT_pub_mm_ens58_ncbim37_6509
Name(s):	Dppa5a
Description:	developmental pluripotency associated 5A Gene [Source:MGI (curated);Acc:MGI:101800]
Feature Type:	protein_coding

Genomic Location

Chromosome / Reference Scaffold:

9 (#9)

Strand:

-

Start:

78,214,859

End:

78,215,984

Length:

1,125bp

Intervals / Exons:

78,214,859 - 78,215,101 (length = 242bp)
78,215,528 - 78,215,710 (length = 182bp)
78,215,792 - 78,215,984 (length = 192bp)

Transcript Variants:

Accession	Exons	Transcript Length
ENSMUST00000071991	78,214,859 - 78,215,101, 78,215,528 - 78,215,710, 78,215,792 - 78,215,984	619bp

Dppa5a locus

[open region in genome browser]

Functional Annotation (from Gene Ontology)

Click here to display these information.

Loading content..

Protein Interactions (from BioGRID)

Click here to display these information.

Loading content..

External Database Identifiers and Accession Numbers

Click here to display these information.

Additional Information about this Gene in Other Databases

Ensembl

iHOP

Uniprot

StemDB

Type	Value(s)	Type	Value(s)
Affymetrix 430_2 Probe ID	1416552_at		Affymetrix 430A Probe ID	1416552_at
Affymetrix 430A_2 Probe ID	1416552_at		Agilent Probe ID	A_52_P362403
Ensembl Gene ID	ENSMUSG00000060461		Entrez ID	434423
Fantom ID	98006 4711 19890		Illumina WG v2 Probe ID	ILMN_3090545 ILMN_3018711
IPI ID	IPI00173116		MGI ID	MGI:101800
UniProt/SwissProt ID	Q9CQS7		Illumina WG v2 Probe IDAffymetrix mg u74a v2 Probe ID	160370_at
RefSeq ID	XR_032242 NM_025274 XR_031240 XR_004662		UCSC ID	uc009qug.1

Public GeneProf Data for this Feature

Expression

DNA-Binding Activity

Transcription Factors / Proteins Binding near this Feature