Ensembl 58 Mouse Genes, NCBIM37 Assembly - Sfpi1 (Record #28193)

Dataset:

Ensembl 58 Mouse Genes, NCBIM37 Assembly (gpDS_pub_mm_ens58_ncbim37)

Search for a Gene

Feature 'Sfpi1'

Permalink:	http://www.geneprof.org/GeneProf/show?id=gpFT_pub_mm_ens58_ncbim37_28193
Name(s):	Sfpi1
Description:	SFFV proviral integration 1 Gene [Source:MGI (curated);Acc:MGI:98282]
Feature Type:	protein_coding

Protein Structure (from PDB)

Genomic Location

Chromosome / Reference Scaffold:

2 (#2)

Strand:

Start:

90,936,253

End:

90,955,913

Length:

19,660bp

Intervals / Exons:

90,936,253 - 90,937,150 (length = 897bp)
90,939,557 - 90,939,683 (length = 126bp)
90,953,412 - 90,953,602 (length = 190bp)
90,954,402 - 90,954,567 (length = 165bp)
90,955,232 - 90,955,913 (length = 681bp)

Transcript Variants:

Accession	Exons	Transcript Length
ENSMUST00000132741	90,936,937 - 90,937,150, 90,939,557 - 90,939,683, 90,953,412 - 90,953,440	370bp
ENSMUST00000002180	90,936,253 - 90,937,150, 90,939,587 - 90,939,683, 90,953,412 - 90,953,602, 90,954,402 - 90,954,567, 90,955,232 - 90,955,913	2,034bp

Sfpi1 locus

[open region in genome browser]

Functional Annotation (from Gene Ontology)

Click here to display these information.

Loading content..

Protein Interactions (from BioGRID)

Click here to display these information.

Loading content..

External Database Identifiers and Accession Numbers

Click here to display these information.

Additional Information about this Gene in Other Databases

Ensembl

iHOP

Uniprot

StemDB

Type	Value(s)	Value(s)
Affymetrix 430_2 Probe ID	1418747_at	Affymetrix 430A Probe ID	1418747_at
Affymetrix 430A_2 Probe ID	1418747_at	Agilent Probe ID	A_52_P498086
Ensembl Gene ID	ENSMUSG00000002111	Entrez ID	20375
Fantom ID	72320 92035 105088 93501	Illumina WG v1 Probe ID	ILMN_1235139
Illumina WG v2 Probe ID	ILMN_1235139	IPI ID	IPI00116335
MGI ID	MGI:98282	UniProt/SwissProt ID	Q3U5L4 P17433
Illumina WG v2 Probe IDAffymetrix mg u74a v2 Probe ID	102641_at	Affymetrix mg u74a Probe ID	102641_at
RefSeq ID	NM_011355	UCSC ID	uc008kuj.1
UniGene ID	Mm.1302

Ensembl 58 Mouse Genes, NCBIM37 Assembly - Sfpi1 (Record #28193)

Feature 'Sfpi1'

Protein Structure (from PDB)

Genomic Location

Sfpi1 locus

Functional Annotation (from Gene Ontology)

Protein Interactions (from BioGRID)

External Database Identifiers and Accession Numbers

Additional Information about this Gene in Other Databases

Public GeneProf Data for this Feature

Experiments Specifically Dealing with this Feature

Expression

DNA-Binding Activity

Transcription Factors / Proteins Binding near this Feature