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Ensembl 58 Mouse Genes, NCBIM37 Assembly - Esrrb (Record #29645)

Dataset:

Ensembl 58 Mouse Genes, NCBIM37 Assembly (gpDS_pub_mm_ens58_ncbim37)

Search for a Gene

Feature 'Esrrb'

Permalink:	http://www.geneprof.org/GeneProf/show?id=gpFT_pub_mm_ens58_ncbim37_29645
Name(s):	Esrrb
Description:	estrogen related receptor, beta Gene [Source:MGI (curated);Acc:MGI:1346832]
Feature Type:	protein_coding

Genomic Location

Chromosome / Reference Scaffold:

12 (#12)

Strand:

+

Start:

87,702,067

End:

87,862,575

Length:

160,508bp

Intervals / Exons:

87,702,067 - 87,702,488 (length = 421bp)
87,762,594 - 87,762,914 (length = 320bp)
87,811,096 - 87,811,505 (length = 409bp)
87,829,497 - 87,829,613 (length = 116bp)
87,845,363 - 87,845,473 (length = 110bp)
87,846,765 - 87,846,875 (length = 110bp)
87,847,299 - 87,847,460 (length = 161bp)
87,850,612 - 87,850,914 (length = 302bp)
87,855,231 - 87,856,472 (length = 1,241bp)
87,859,771 - 87,862,575 (length = 2,804bp)

Transcript Variants:

Accession	Exons	Transcript Length
ENSMUST00000116402	87,811,097 - 87,811,505, 87,829,497 - 87,829,613, 87,846,765 - 87,846,875, 87,847,299 - 87,847,460, 87,855,231 - 87,855,500, 87,859,771 - 87,862,572	3,871bp
ENSMUST00000136464	87,845,363 - 87,845,473, 87,846,765 - 87,846,875, 87,847,299 - 87,847,460, 87,850,612 - 87,850,914	687bp
ENSMUST00000110207	87,811,105 - 87,811,505, 87,829,497 - 87,829,613, 87,846,765 - 87,846,875, 87,847,299 - 87,847,460, 87,855,231 - 87,855,500, 87,859,771 - 87,862,572	3,863bp
ENSMUST00000110203	87,762,594 - 87,762,914, 87,811,096 - 87,811,505, 87,829,497 - 87,829,613, 87,846,765 - 87,846,875, 87,847,299 - 87,847,460, 87,855,231 - 87,856,472	2,363bp
ENSMUST00000110204	87,762,787 - 87,762,914, 87,811,096 - 87,811,505, 87,829,497 - 87,829,613, 87,846,765 - 87,846,875, 87,847,299 - 87,847,460, 87,855,231 - 87,855,500, 87,859,771 - 87,862,575	4,003bp
ENSMUST00000021680	87,702,067 - 87,702,488, 87,811,096 - 87,811,505, 87,829,497 - 87,829,613, 87,846,765 - 87,846,875, 87,847,299 - 87,847,460, 87,855,231 - 87,855,500, 87,859,771 - 87,862,570	4,292bp

Esrrb locus

[open region in genome browser]

Functional Annotation (from Gene Ontology)

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Protein Interactions (from BioGRID)

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External Database Identifiers and Accession Numbers

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Additional Information about this Gene in Other Databases

Ensembl

iHOP

Uniprot

StemDB

Type	Value(s)	Type	Value(s)
Affymetrix 430_2 Probe ID	1436926_at 1422986_at		Affymetrix 430A Probe ID	1436926_at 1422986_at
Affymetrix 430A_2 Probe ID	1436926_at 1422986_at		Agilent Probe ID	A_51_P419047 A_52_P628212
Ensembl Gene ID	ENSMUSG00000021255		Entrez ID	26380
Fantom ID	45889 32730		Illumina WG v1 Probe ID	ILMN_1228497 ILMN_2555396
Illumina WG v2 Probe ID	ILMN_1228497 ILMN_2555396		IPI ID	IPI00874774 IPI00752694
MGI ID	MGI:1346832		UniProt/SwissProt ID	A2RTQ7 Q61539 Q8CCV5 Q80VS1
Illumina WG v2 Probe IDAffymetrix mg u74a v2 Probe ID	100301_at 168508_at		Affymetrix mg u74a Probe ID	100301_at
RefSeq ID	NM_001159500 NM_011934		UCSC ID	uc007oht.1 uc007ohv.1 uc007ohu.1 uc007ohw.1
UniGene ID	Mm.235550 Mm.418593

Public GeneProf Data for this Feature

Experiments Specifically Dealing with this Feature

Expression

DNA-Binding Activity

Transcription Factors / Proteins Binding near this Feature